Search result

BaseInfo

ncRNA ID novel_bol_miR243
Species Brassica oleracea
Class miRNA
Genome position ChrC4:50625201-50625371 [+]
Reference genome BOL
Source SRR961924
Length 27
Mature sequence(if miRNA) 145 - AGAGGAACACAUUGGAGCAAAAACAUC - 171
Stem-loop(if miRNA) --                    A             A                                           CC   A
  UGUUUUUGCUCCAAUGUGUU UUCUAUAAUAGAG AAUGCUAUAUUUGUCUCUAUAAAUAGAGGAAUGUUAUUUUUUC  CUA A
  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||
  ACAAAAACGAGGUUACACAA GAGAUAUUAUCUC UUACGAUAUAAACAGAGAUAUUUAUCUCCUUACGAUAAAAAAG  GAU U
CU                    G             C                                           -A   A
Stem-loop sequence UGUUUUUGCUCCAAUGUGUUAUUCUAUAAUAGAGAAAUGCUAUAUUUGUCUCUAUAAAUAGAGGAAUGUUAUUUUUUCCCCUAAAUAUAGAGAAAAAAUAGCAUUCCUCUAUUUAUAGAGACAAAUAUAGCAUUCCUCUAUUAUAGAGGAACACAUUGGAGCAAAAACAUC