ncRNA ID | novel_bol_miR243 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:50625201-50625371 [+] |
Reference genome | BOL |
Source | SRR961924 |
Length | 27 |
Mature sequence(if miRNA) | 145 - AGAGGAACACAUUGGAGCAAAAACAUC - 171 |
Stem-loop(if miRNA) |
--                    A             A                                           CC   A   UGUUUUUGCUCCAAUGUGUU UUCUAUAAUAGAG AAUGCUAUAUUUGUCUCUAUAAAUAGAGGAAUGUUAUUUUUUC  CUA A   |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||   ACAAAAACGAGGUUACACAA GAGAUAUUAUCUC UUACGAUAUAAACAGAGAUAUUUAUCUCCUUACGAUAAAAAAG  GAU U CU                    G             C                                           -A   A |
Stem-loop sequence | UGUUUUUGCUCCAAUGUGUUAUUCUAUAAUAGAGAAAUGCUAUAUUUGUCUCUAUAAAUAGAGGAAUGUUAUUUUUUCCCCUAAAUAUAGAGAAAAAAUAGCAUUCCUCUAUUUAUAGAGACAAAUAUAGCAUUCCUCUAUUAUAGAGGAACACAUUGGAGCAAAAACAUC |