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BaseInfo

ncRNA ID	novel_bol_miR240
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC4:32855159-32855244 [+]
Reference genome	BOL
Source	SRR961924
Length	25
Mature sequence(if miRNA)	1 - AGGGUUUAGGGUUUAGGAUUUAGAU - 25
Stem-loop(if miRNA)	--   G      G      A             G      G U   AGG UUUAGG UUUAGG UUUAGAUUUUAGG UUUAGG U U   ||| |||||| |||||| ||||||||||||| |||||| |   UUU GGAUUU AGAUUU GGAUUUGGGAUUU AGAUUU G A AA   G      G      G             G      G G
Stem-loop sequence	AGGGUUUAGGGUUUAGGAUUUAGAUUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013758425.1	ncRNA:25   UAGAU--------UUAGGAUUUGGGAUUUGGGA   1   |||||--------||||*||||||||||||||| targets:292   AUCUAGGCGAAAAAAUCGUAAACCCUAAACCCU   324 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea protein RALF-like 9 (LOC106320059), mRNA	protein RALF-like 9(LOC106320059)	coding protein	psRNATarget
XM_013737539.1	ncRNA:25   UAGAUUUAGGA--UUUGGGAUUUGGGA   1   |*|*|*|||||--|||||||||||||| targets:142   ACCCAUAUCCUCGAAACCCUAAACCCU   168 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea pentatricopeptide repeat-containing protein At2g16880 (LOC106301193), mRNA	pentatricopeptide repeat-containing protein At2g16880(LOC106301193)	coding protein	psRNATarget
XM_013763140.1	ncRNA:25   UAGAUUUAGGA---UUUGGGAUUUGGGA   1   ||*||*|||||---|||||||||||||| targets:140   AUAUAUAUCCUCAUAAACCCUAAACCCU   167 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106325113 (LOC106325113), mRNA	uncharacterized LOC106325113(LOC106325113)	coding protein	psRNATarget
XM_013734506.1	ncRNA:25   UAGAUUUAGGA---UUUGGGAUUUGGGA   1   ||=|--|||||---|||||||||||||| targets:84   AUUU--AUCCUCAUAAACCCUAAACCCU   109 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106298395 (LOC106298395), mRNA	uncharacterized LOC106298395(LOC106298395)	coding protein	psRNATarget