ncRNA ID | novel_bol_miR239 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:30943104-30943237 [+] |
Reference genome | BOL |
Source | SRR961924 |
Length | 24 |
Mature sequence(if miRNA) | 111 - AGAGGAAUUCUAUUAUAGAGGCGG - 134 |
Stem-loop(if miRNA) |
--  A G       C             -  GA              AAAA   C    UG      U   GC U UAUAAUA AGUUCCUCUAUUU UA  AGAAAAUAUAGAGG    UUA UUUU  UUUCUA A   || | ||||||| ||||||||||||| ||  ||||||||||||||    ||| ||||  ||||||   CG A AUAUUAU UUAAGGAGAUAAA AU  UCUUUUAUAUCUCU    GAU AAAA  GGAGAU A GG  G G       C             U  AC              AUAC   -    GU      U |
Stem-loop sequence | GCAUGUAUAAUACAGUUCCUCUAUUUUAGAAGAAAAUAUAGAGGAAAAUUACUUUUUGUUUCUAUAAUUAGAGGUGAAAAUAGCAUAUCUCUAUAUUUUCUCAUAUAAAUAGAGGAAUUCUAUUAUAGAGGCGG |