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BaseInfo

ncRNA ID novel_bol_miR239
Species Brassica oleracea
Class miRNA
Genome position ChrC4:30943104-30943237 [+]
Reference genome BOL
Source SRR961924
Length 24
Mature sequence(if miRNA) 111 - AGAGGAAUUCUAUUAUAGAGGCGG - 134
Stem-loop(if miRNA) --  A G       C             -  GA              AAAA   C    UG      U
  GC U UAUAAUA AGUUCCUCUAUUU UA  AGAAAAUAUAGAGG    UUA UUUU  UUUCUA A
  || | ||||||| ||||||||||||| ||  ||||||||||||||    ||| ||||  ||||||
  CG A AUAUUAU UUAAGGAGAUAAA AU  UCUUUUAUAUCUCU    GAU AAAA  GGAGAU A
GG  G G       C             U  AC              AUAC   -    GU      U
Stem-loop sequence GCAUGUAUAAUACAGUUCCUCUAUUUUAGAAGAAAAUAUAGAGGAAAAUUACUUUUUGUUUCUAUAAUUAGAGGUGAAAAUAGCAUAUCUCUAUAUUUUCUCAUAUAAAUAGAGGAAUUCUAUUAUAGAGGCGG