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BaseInfo

ncRNA ID ath-miRf10707-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCUCUUGCAACCCAUCGAGA - NA
Stem-loop(if miRNA)     G  G    C            G GAA        A  UU
UAGU AU UUCU UUGCAACCCAUC A   AGGGUUUA UC  G
|||| || |||| |||||||||||| |   |||||||| ||
AUCA UA AAGA GACGUUGGGUAG U   UUUCGAAU AG  C
    G  G    C            G --G        -  UA
Stem-loop sequence UAGUGAUGUUCUCUUGCAACCCAUCGAGAAAGGGUUUAAUCUUGCAUGAUAAGCUUUGUGGAUGGGUUGCAGCAGAAGAUGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX818094.1
ncRNA:20   AGAGCUACCCAACGUUCUCU   1
  ||||||||||||||||||||
targets:602   UCUCGAUGGGUUGCAAGAGA   621

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK222221.1
ncRNA:20   AGAGCUACCCAACGUUCUCU   1
  ||||||||||||||||||||
targets:615   UCUCGAUGGGUUGCAAGAGA   634

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-29-M09 NA coding protein psRNATarget
EF183269.1
ncRNA:20   AGAGCUACCCAACGUUCUCU   1
  ||||||||||||||||||||
targets:684   UCUCGAUGGGUUGCAAGAGA   703

0.0 Arabidopsis thaliana clone asmbl_4219 unknown mRNA sequence NA coding protein psRNATarget
NM_001084363.2
ncRNA:20   AGAGCUACCCAACGUUCUCU   1
  ||||||||||||||||||||
targets:934   UCUCGAUGGGUUGCAAGAGA   953

0.0 Arabidopsis thaliana LYR family of Fe/S cluster biogenesis protein mRNA LYR family of Fe/S cluster biogenesis protein(AT1G76065) coding protein psRNATarget