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BaseInfo

ncRNA ID	novel_bol_miR221
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC3:47734623-47734684 [-]
Reference genome	BOL
Source	SRR961924
Length	19
Mature sequence(if miRNA)	1 - GGAGAUAGUUGAGAAUGUG - 19
Stem-loop(if miRNA)	--CGGA      -       CC UU    - G       UUUAAC AUCUCUU  G  GGGG C C       |||||| |||||||  |  |||| |       GAGUUG UAGAGGG  U  CCCC G U GUGUAA      A       AC UU    A G
Stem-loop sequence	CGGAUUUAACAUCUCUUCCGUUGGGGCGCUGGACCCCUUUCAGGGAGAUAGUUGAGAAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013749880.1	ncRNA:19   GUGUAAGAGUUGAUAGAGG   1   =||||||*||||||||||| targets:995   UACAUUCCCAACUAUCUCC   1013 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea putative GATA transcription factor 22 (LOC106312371), transcript variant X2, mRNA	putative GATA transcription factor 22(LOC106312371)	coding protein	psRNATarget
XM_013750094.1	ncRNA:19   GUGUAAGAGUUGAUAGAGG   1   |||*||||||||*|||||| targets:319   CACCUUCUCAACCAUCUCC   337 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106312533 (LOC106312533), mRNA	uncharacterized LOC106312533(LOC106312533)	coding protein	psRNATarget
XM_013743130.1	ncRNA:19   GUGUAAGAGUUGAUAGAGG   1   |*||*|||||||||||||* targets:1259   CUCAGUCUCAACUAUCUCA   1277 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea serine/threonine-protein kinase BRI1-like 2 (LOC106306494), mRNA	serine/threonine-protein kinase BRI1-like 2(LOC106306494)	coding protein	psRNATarget