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BaseInfo

ncRNA ID novel_bol_miR198
Species Brassica oleracea
Class miRNA
Genome position ChrC8:31902791-31902973 [-]
Reference genome BOL
Source SRR961925
Length 27
Mature sequence(if miRNA) 1 - AGUGGGGUUGGAGAUGCUCUAAGGAUC - 27
Stem-loop(if miRNA) ---   A                   G       --          AG                                AA       - UA
   UCU AGAGCAUCUCCAACUCCAC GCAAAAA  ACUGCAAAAU  AGUGGAAAAUGCAGUCAUGAACAAACAAAAAA  CAUUACU C  C
   ||| ||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||||||||||||||  ||||||| |  A
   GGA UCUCGUAGAGGUUGGGGUG CGUUUUU  UGACGUUUUA  UCACUUUUUACGUCAGUACUUGUUUGUUUUUU  GUAAUGA G  U
CUA   A                   A       UU          CU                                CC       C UA
Stem-loop sequence UCUAAGAGCAUCUCCAACUCCACGGCAAAAAACUGCAAAAUAGAGUGGAAAAUGCAGUCAUGAACAAACAAAAAAAACAUUACUCUACAUAUGCAGUAAUGCCUUUUUUGUUUGUUCAUGACUGCAUUUUUCACUUCAUUUUGCAGUUUUUUUUGCAGUGGGGUUGGAGAUGCUCUAAGGAUC