Search result

BaseInfo

ncRNA ID	novel_bol_miR194
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC7:7496965-7497068 [+]
Reference genome	BOL
Source	SRR961925
Length	21
Mature sequence(if miRNA)	84 - GUCGGAAUUUCGUCGGAAAUC - 104
Stem-loop(if miRNA)	--AG    U          U    AAUCUG    U          U    AA     UCCG UGGAAUUUCG CGGA      UCCG CGGAAUUUCG CGGA  U     |||| |||||||||| ||||      |||| |||||||||| ||||     AGGC GCUUUAAGGC GCCU      AGGC GCUUUAAGGC GCCU  C CUAA    U          U    AUCUAA    U          U    AU
Stem-loop sequence	AGUCCGUUGGAAUUUCGUCGGAAAUCUGUCCGUCGGAAUUUCGUCGGAAAUCUAUCCGUCGGAAUUUCGUCGGAAAUCUAUCCGUCGGAAUUUCGUCGGAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013783616.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:336   ACUUCCCGACGAAAUACCGAC   356 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106344202 (LOC106344202), mRNA	uncharacterized LOC106344202(LOC106344202)	coding protein	psRNATarget
XM_013768678.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:356   ACUUCCCGACGAAAUACCGAC   376 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330138 (LOC106330138), mRNA	uncharacterized LOC106330138(LOC106330138)	coding protein	psRNATarget
XM_013784163.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:341   ACUUCCCGACGAAAUACCGAC   361 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106344864 (LOC106344864), mRNA	uncharacterized LOC106344864(LOC106344864)	coding protein	psRNATarget
XM_013746423.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:364   ACUUCCCGACGAAAUACCGAC   384 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106309397 (LOC106309397), mRNA	uncharacterized LOC106309397(LOC106309397)	coding protein	psRNATarget
XM_013768829.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:364   ACUUCCCGACGAAAUACCGAC   384 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330347 (LOC106330347), mRNA	uncharacterized LOC106330347(LOC106330347)	coding protein	psRNATarget
XM_013762110.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:367   ACUUCCCGACGAAAUACCGAC   387 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106324088 (LOC106324088), mRNA	uncharacterized LOC106324088(LOC106324088)	coding protein	psRNATarget
XM_013759312.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:319   ACUUCCCGACGAAAUACCGAC   339 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106320975 (LOC106320975), mRNA	uncharacterized LOC106320975(LOC106320975)	coding protein	psRNATarget
XM_013749194.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:333   ACUUCCCGACGAAAUACCGAC   353 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106311846 (LOC106311846), mRNA	uncharacterized LOC106311846(LOC106311846)	coding protein	psRNATarget
XM_013767478.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:333   ACUUCCCGACGAAAUACCGAC   353 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328932 (LOC106328932), mRNA	uncharacterized LOC106328932(LOC106328932)	coding protein	psRNATarget
XM_013783074.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:336   ACUUCCCGACGAAAUACCGAC   356 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106343773 (LOC106343773), mRNA	uncharacterized LOC106343773(LOC106343773)	coding protein	psRNATarget
XM_013764792.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:336   ACUUCCCGACGAAAUACCGAC   356 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106326846 (LOC106326846), mRNA	uncharacterized LOC106326846(LOC106326846)	coding protein	psRNATarget
XM_013759562.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:336   ACUUCCCGACGAAAUACCGAC   356 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106321260 (LOC106321260), mRNA	uncharacterized LOC106321260(LOC106321260)	coding protein	psRNATarget
XM_013767459.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:338   ACUUCCCGACGAAAUACCGAC   358 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328917 (LOC106328917), mRNA	uncharacterized LOC106328917(LOC106328917)	coding protein	psRNATarget
XM_013766668.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:356   ACUUCCCGACGAAAUACCGAC   376 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328259 (LOC106328259), mRNA	uncharacterized LOC106328259(LOC106328259)	coding protein	psRNATarget
XM_013751359.1	ncRNA:21   CUAAAGGCUGCUUUAAGGCUG   1   **||*||||||||||*||||| targets:361   ACUUCCCGACGAAAUACCGAC   381 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106313531 (LOC106313531), mRNA	uncharacterized LOC106313531(LOC106313531)	coding protein	psRNATarget