ncRNA ID | novel_bol_miR187 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC7:47742135-47742267 [-] |
Reference genome | BOL |
Source | SRR961925 |
Length | 23 |
Mature sequence(if miRNA) | 111 - AACGGAAUAUAAGAACCUGACUC - 133 |
Stem-loop(if miRNA) |
--AAC            C   A                      UC   A   C          UA      GGAAUAUAAGAA CUG CUCUUAACUUUUAAUUAAAAAA  UAA AAU GUCUCUUAAA  A      |||||||||||| ||| ||||||||||||||||||||||  ||| ||| ||||||||||  G      CCUUAUAUUCUU GGC GAGAAUUGAAAAUUGAUUUUUU  AUU UUG CAGAGAAUUU  A AAUAU            A   A                      GA   C   A          UA |
Stem-loop sequence | AACGGAAUAUAAGAACCUGACUCUUAACUUUUAAUUAAAAAAUCUAAAAAUCGUCUCUUAAAUAAGAAUUUUAAGAGACAGUUCUUAAGUUUUUUAGUUAAAAGUUAAGAGACGGAUUCUUAUAUUCCUAUAA |