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BaseInfo

ncRNA ID ath-miRf10703-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GAGGACUCCAAGUGUGGUUA - NA
Stem-loop(if miRNA)                             -      CUC  UA
AAACAUGUGGGAGGACUCCAAGUGUGGU UAUAUC   GG  U
|||||||||||||||||||||||||||| ||||||   ||
UUUGUACACCCUCCUGAGGUUCACACCA GUGUAG   UC  U
                            A      --C  UA
Stem-loop sequence AAACAUGUGGGAGGACUCCAAGUGUGGUUAUAUCCUCGGUAUUAUCUCGAUGUGAACCACACUUGGAGUCCUCCCACAUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ027019.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:267   UAACCAAACUUGGAGUCCUA   286

2.0 Arabidopsis thaliana ubiquitinating enzyme (At5g41340) mRNA, complete cds NA coding protein psRNATarget
AY096587.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:267   UAACCAAACUUGGAGUCCUA   286

2.0 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2-21 kD 1 (At5g41340) mRNA, complete cds NA coding protein psRNATarget
AY065360.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:441   UAACCAAACUUGGAGUCCUA   460

2.0 Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC4 (At5g41340) mRNA, complete cds NA coding protein psRNATarget
NM_123499.5
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:500   UAACCAAACUUGGAGUCCUA   519

2.0 Arabidopsis thaliana ubiquitin conjugating enzyme 4 (UBC4), mRNA ubiquitin conjugating enzyme 4(UBC4) coding protein psRNATarget
NM_001344399.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:883   UAACCAAACUUGGAGUCCUA   902

2.0 Arabidopsis thaliana ubiquitin conjugating enzyme 4 (UBC4), mRNA ubiquitin conjugating enzyme 4(UBC4) coding protein psRNATarget
BX832125.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:821   UAACCAAACUUGGAGUCCUA   840

2.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX832123.1
ncRNA:20   AUUGGUGUGAACCUCAGGAG   1
  ||||||*||||||||||||*
targets:822   UAACCAAACUUGGAGUCCUA   841

2.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget