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BaseInfo

ncRNA ID novel_bol_miR180
Species Brassica oleracea
Class miRNA
Genome position ChrC6:34106167-34106316 [-]
Reference genome BOL
Source SRR961925
Length 22
Mature sequence(if miRNA) 129 - UAGCGGAAUAUAAGAACAUAUC - 150
Stem-loop(if miRNA) --                 AUA         UAAU               -C                   CC   U
  UAGCGGAAUAUAAGAAC   UCUCUUAAU    UUUUAACUAAAAAAG  UAAGAACCGGCUUUUAGAA  GGU C
  |||||||||||||||||   |||||||||    |||||||||||||||  |||||||||||||||||||  ||| U
  AUCGCCUUAUAUUCUUG   AGAGAAUUG    AAAAUUGAUUUUUUU  AUUCUUGGCCGAGAAUUUU  UUA U
GA                 GUC         ----               UA                   UU   A
Stem-loop sequence UAGCGGAAUAUAAGAACAUAUCUCUUAAUUAAUUUUUAACUAAAAAAGCUAAGAACCGGCUUUUAGAACCGGUUCUUAAUUUUUUUUAAGAGCCGGUUCUUAAUUUUUUUUAGUUAAAAGUUAAGAGACUGGUUCUUAUAUUCCGCUAAG