ncRNA ID | novel_bol_miR173 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC6:15120803-15120961 [+] |
Reference genome | BOL |
Source | SRR961925 |
Length | 25 |
Mature sequence(if miRNA) | 135 - GAAUUAUAAGUCGUCUGUAUAUAAU - 159 |
Stem-loop(if miRNA) |
----      CU                         G        GAA UA         C       ----A        G     UAUACA  GACGACUUAUAAUUCAGUCGUCCAC AGACGACU   A  UAAGUCGUC AGGAUUU     CGAGGUUU A     ||||||  ||||||||||||||||||||||||| ||||||||   |  ||||||||| |||||||     |||||||| C     AUAUGU  CUGCUGAAUAUUAAGUCAGCAGGUG UCUGCUGA   U  AUUCAGCAG UCCUAAA     GCUCUAAG C UAAU      --                         G        AUG UC         C       AAAAG        A |
Stem-loop sequence | UAUACACUGACGACUUAUAAUUCAGUCGUCCACGAGACGACUGAAAUAUAAGUCGUCCAGGAUUUACGAGGUUUGACCAGAAUCUCGGAAAAAAAUCCUCGACGACUUACUUGUAAGUCGUCUGGUGGACGACUGAAUUAUAAGUCGUCUGUAUAUAAU |