ncRNA ID | novel_bol_miR171 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC5:21472331-21472491 [-] |
Reference genome | BOL |
Source | SRR961925 |
Length | 24 |
Mature sequence(if miRNA) | 138 - AGGAUGGGGUUCUUAGCGGAAGUU - 161 |
Stem-loop(if miRNA) |
--  GA                                              A    A C    A       C     UA   AG  UGGGGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUUUAACU AAAA G UAAA ACCGGUU UUAAA  A   ||  |||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||| |||||  G   UC  ACUCCAAGAAUUGCUUUUAAUUCUUUGACAAAGAAUUGAAAAUUGA UUUU U AUUU UGGCCAA AAUUU  G AA  UC                                              A    A A    C       A     UA |
Stem-loop sequence | AGGAUGGGGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAAAGCUAAAAACCGGUUCUUAAAUAAGGAUUUUAAAAACCGGUCUUUAAUAUUUUAAGUUAAAAGUUAAGAAACAGUUUCUUAAUUUUCGUUAAGAACCUCACUCUAA |