Search result

BaseInfo

ncRNA ID novel_bol_miR170
Species Brassica oleracea
Class miRNA
Genome position ChrC5:23424955-23425151 [-]
Reference genome BOL
Source SRR961925
Length 22
Mature sequence(if miRNA) 176 - GCUGGACGACUUAGUAGACGAC - 197
Stem-loop(if miRNA) --      C           C             A     G       C                           G           A      AUA
  GCUGGA GACUUAGUAGA GACUUGUAAUUAA UCGUC GGAAAGU UUCCAGCUGGAAGACUUAGUAGAAGAC UAUAAUUAAGU GUCUGG   G
  |||||| ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||   U
  UGACCU CUGAAUCAUUU CUGAAUAUUAAUU AGCAG CCUUUCA AAGGUCGACCUUCUGAAUCAUCUUCUG AUAUUAAUUCA CAGACC   C
GU      U           U             C     A       C                           A           G      CUU
Stem-loop sequence GCUGGACGACUUAGUAGACGACUUGUAAUUAAAUCGUCGGGAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACGUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCUUCCAGCUGGAACACUUUCCAGACGACUUAAUUAUAAGUCUUUUACUAAGUCUUCCAGUUG