ncRNA ID | novel_bol_miR170 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC5:23424955-23425151 [-] |
Reference genome | BOL |
Source | SRR961925 |
Length | 22 |
Mature sequence(if miRNA) | 176 - GCUGGACGACUUAGUAGACGAC - 197 |
Stem-loop(if miRNA) |
--      C           C             A     G       C                           G           A      AUA   GCUGGA GACUUAGUAGA GACUUGUAAUUAA UCGUC GGAAAGU UUCCAGCUGGAAGACUUAGUAGAAGAC UAUAAUUAAGU GUCUGG   G   |||||| ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||   U   UGACCU CUGAAUCAUUU CUGAAUAUUAAUU AGCAG CCUUUCA AAGGUCGACCUUCUGAAUCAUCUUCUG AUAUUAAUUCA CAGACC   C GU      U           U             C     A       C                           A           G      CUU |
Stem-loop sequence | GCUGGACGACUUAGUAGACGACUUGUAAUUAAAUCGUCGGGAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACGUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCUUCCAGCUGGAACACUUUCCAGACGACUUAAUUAUAAGUCUUUUACUAAGUCUUCCAGUUG |