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BaseInfo

ncRNA ID novel_bol_miR166
Species Brassica oleracea
Class miRNA
Genome position ChrC5:33038031-33038076 [-]
Reference genome BOL
Source SRR961925;SRR961924
Length 22
Mature sequence(if miRNA) 25 - GUCGGUAUGUCGUCGGAAUAUC - 46
Stem-loop(if miRNA) --                    U
  GUCGGUAUGUCGUCGGAAUA C
  ||||||||||||||||||||
  CAGCCAUACAGCAGCCUUAU G
AG                    U
Stem-loop sequence GUCGGUAUGUCGUCGGAAUAUCGUUAUUCCGACGACAUACCGACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013783616.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:207   GAAAUACCGACGGCAUACCGAC   228

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106344202 (LOC106344202), mRNA uncharacterized LOC106344202(LOC106344202) coding protein psRNATarget
XM_013768678.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:227   GAAAUACCGACGGCAUACCGAC   248

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330138 (LOC106330138), mRNA uncharacterized LOC106330138(LOC106330138) coding protein psRNATarget
XM_013784163.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:212   GAAAUACCGACGGCAUACCGAC   233

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106344864 (LOC106344864), mRNA uncharacterized LOC106344864(LOC106344864) coding protein psRNATarget
XM_013746423.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:235   GAAAUACCGACGGCAUACCGAC   256

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106309397 (LOC106309397), mRNA uncharacterized LOC106309397(LOC106309397) coding protein psRNATarget
XM_013768829.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:235   GAAAUACCGACGGCAUACCGAC   256

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330347 (LOC106330347), mRNA uncharacterized LOC106330347(LOC106330347) coding protein psRNATarget
XM_013762110.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:238   GAAAUACCGACGGCAUACCGAC   259

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106324088 (LOC106324088), mRNA uncharacterized LOC106324088(LOC106324088) coding protein psRNATarget
XM_013759312.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:190   GAAAUACCGACGGCAUACCGAC   211

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106320975 (LOC106320975), mRNA uncharacterized LOC106320975(LOC106320975) coding protein psRNATarget
XM_013767478.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:204   GAAAUACCGACGGCAUACCGAC   225

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328932 (LOC106328932), mRNA uncharacterized LOC106328932(LOC106328932) coding protein psRNATarget
XM_013749194.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:204   GAAAUACCGACGGCAUACCGAC   225

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106311846 (LOC106311846), mRNA uncharacterized LOC106311846(LOC106311846) coding protein psRNATarget
XM_013783074.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:207   GAAAUACCGACGGCAUACCGAC   228

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106343773 (LOC106343773), mRNA uncharacterized LOC106343773(LOC106343773) coding protein psRNATarget
XM_013764792.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:207   GAAAUACCGACGGCAUACCGAC   228

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106326846 (LOC106326846), mRNA uncharacterized LOC106326846(LOC106326846) coding protein psRNATarget
XM_013759562.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:207   GAAAUACCGACGGCAUACCGAC   228

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106321260 (LOC106321260), mRNA uncharacterized LOC106321260(LOC106321260) coding protein psRNATarget
XM_013767459.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:209   GAAAUACCGACGGCAUACCGAC   230

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328917 (LOC106328917), mRNA uncharacterized LOC106328917(LOC106328917) coding protein psRNATarget
XM_013766668.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:227   GAAAUACCGACGGCAUACCGAC   248

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106328259 (LOC106328259), mRNA uncharacterized LOC106328259(LOC106328259) coding protein psRNATarget
XM_013751359.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  ||*||*||||||=|||||||||
targets:232   GAAAUACCGACGGCAUACCGAC   253

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106313531 (LOC106313531), mRNA uncharacterized LOC106313531(LOC106313531) coding protein psRNATarget
XM_013738725.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  *||||*|||||||||||*||||
targets:1276   AAUAUACCGACGACAUAGCGAC   1297

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106302189 (LOC106302189), mRNA uncharacterized LOC106302189(LOC106302189) coding protein psRNATarget
XM_013762314.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  *||||*|||||||||||*||||
targets:1393   AAUAUACCGACGACAUAGCGAC   1414

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106324327 (LOC106324327), mRNA uncharacterized LOC106324327(LOC106324327) coding protein psRNATarget
XM_013783636.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  *||||*|||||||||||*||||
targets:1516   AAUAUACCGACGACAUAGCGAC   1537

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106344221 (LOC106344221), mRNA uncharacterized LOC106344221(LOC106344221) coding protein psRNATarget
XM_013765071.1
ncRNA:22   CUAUAAGGCUGCUGUAUGGCUG   1
  *||||*|||||||||||*||||
targets:1686   AAUAUACCGACGACAUAGCGAC   1707

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106327056 (LOC106327056), mRNA uncharacterized LOC106327056(LOC106327056) coding protein psRNATarget
XM_013768734.1
ncRNA:22   CU--AUAAGGCUGCUGUAUGGCUG   1
  ||--|||*||||||||||*|||||
targets:2925   GAAUUAUACCGACGACAUUCCGAC   2948

2.5 PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330226 (LOC106330226), mRNA uncharacterized LOC106330226(LOC106330226) coding protein psRNATarget
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