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BaseInfo

ncRNA ID	novel_bol_miR160
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC5:360408-360519 [+]
Reference genome	BOL
Source	SRR961925;SRR961924
Length	21
Mature sequence(if miRNA)	92 - UCGGACCAGGCUUCAUCCCCC - 112
Stem-loop(if miRNA)	--  A   UU      A         UUA        --------       --    AUA   GG AUG  GUCUGG UCGAGGAUA   UAUAUACA        CAAAUAC  GUAU   U   || |||  |||||| |||||||||   ||||||||        |||||||  ||||   CC UAC  CGGACC GGCUCUUAU   AUAUAUGU        GUUUGUG  CAUA   G CC  C   UU      A         UAG        AUAUACUA       AA    AUU
Stem-loop sequence	GGAAUGUUGUCUGGAUCGAGGAUAUUAUAUAUACACAAAUACGUAUAUAUGUUAAUACAAGUGUUUGAUCAUAUAUGUAUAUAGAUUAUUCUCGGACCAGGCUUCAUCCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013732033.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:639   UUGGGAUGAAGCCUGGUCCGG   659 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-9 (LOC106295996), transcript variant X2, mRNA	homeobox-leucine zipper protein ATHB-9(LOC106295996)	coding protein	psRNATarget
XM_013732032.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:767   UUGGGAUGAAGCCUGGUCCGG   787 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-9 (LOC106295996), transcript variant X1, mRNA	homeobox-leucine zipper protein ATHB-9(LOC106295996)	coding protein	psRNATarget
XM_013766861.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:965   CUGGGAUGAAGCCUGGUCCGG   985 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-8 (LOC106328424), mRNA	homeobox-leucine zipper protein ATHB-8(LOC106328424)	coding protein	psRNATarget
XM_013781810.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:901   UUGGGAUGAAGCCUGGUCCGG   921 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106342776), transcript variant X2, mRNA	homeobox-leucine zipper protein ATHB-14(LOC106342776)	coding protein	psRNATarget
XM_013781809.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:901   UUGGGAUGAAGCCUGGUCCGG   921 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106342776), transcript variant X1, mRNA	homeobox-leucine zipper protein ATHB-14(LOC106342776)	coding protein	psRNATarget
XM_013756089.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:947   CUGGGAUGAAGCCUGGUCCGG   967 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein REVOLUTA (LOC106318211), mRNA	homeobox-leucine zipper protein REVOLUTA(LOC106318211)	coding protein	psRNATarget
XM_013756973.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:1147   CUGGGAUGAAGCCUGGUCCGG   1167 Target Full Sequence	1.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein REVOLUTA (LOC106318831), mRNA	homeobox-leucine zipper protein REVOLUTA(LOC106318831)	coding protein	psRNATarget
XM_013766306.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||*|||||||||||||||= targets:966   CUGGAAUGAAGCCUGGUCCGG   986 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-15-like (LOC106327973), mRNA	homeobox-leucine zipper protein ATHB-15-like(LOC106327973)	coding protein	psRNATarget
XM_013767636.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||*|||||||||||||||= targets:1045   CUGGUAUGAAGCCUGGUCCGG   1065 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein REVOLUTA-like (LOC106329060), transcript variant X2, mRNA	homeobox-leucine zipper protein REVOLUTA-like(LOC106329060)	coding protein	psRNATarget
XM_013767635.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||*|||||||||||||||= targets:1045   CUGGUAUGAAGCCUGGUCCGG   1065 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein REVOLUTA-like (LOC106329060), transcript variant X1, mRNA	homeobox-leucine zipper protein REVOLUTA-like(LOC106329060)	coding protein	psRNATarget
XM_013782140.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||*|||||||||||||||= targets:1060   UUGGUAUGAAGCCUGGUCCGG   1080 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106343033), mRNA	homeobox-leucine zipper protein ATHB-14(LOC106343033)	coding protein	psRNATarget
XM_013736558.1	ncRNA:21   CCCCCUACUUCGGACCAGGCU   1   **||*|||||||||||||||= targets:1142   CUGGAAUGAAGCCUGGUCCGG   1162 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-15 (LOC106300422), mRNA	homeobox-leucine zipper protein ATHB-15(LOC106300422)	coding protein	psRNATarget