ncRNA ID | novel_bol_miR153 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:10270133-10270230 [+] |
Reference genome | BOL |
Source | SRR961925 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GUCGGAAUUUCGUCGGAAUC - 20 |
Stem-loop(if miRNA) |
--       U           C       AUA      C     --UUU  A   GUCGGAA UUCGUCGGAAU AUUAAAU   UAUUCG GAAAA     UC C   ||||||| ||||||||||| |||||||   |||||| |||||     ||   UAGCCUU GGGUAGCCUUA UAGUUUA   AUGGGC CUUUU     GG G GG       U           -       ---      C     UCUUU  C |
Stem-loop sequence | GUCGGAAUUUCGUCGGAAUCAUUAAAUAUAUAUUCGCGAAAAUUUUCACGCGGUUUCUUUUUCCCGGGUAAUUUGAUAUUCCGAUGGGUUUCCGAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013768734.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106330226 (LOC106330226), mRNA | uncharacterized LOC106330226(LOC106330226) | coding protein | psRNATarget |