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BaseInfo

ncRNA ID novel_bol_miR151
Species Brassica oleracea
Class miRNA
Genome position ChrC4:124418-124494 [+]
Reference genome BOL
Source SRR961925;SRR961924
Length 22
Mature sequence(if miRNA) 1 - UGGAGAAGCAGGGCACGUGCAA - 22
Stem-loop(if miRNA) --     A  CA             CCAACAA   C    U
  UGGAG AG  GGGCACGUGCAAA       ACA GAGA C
  ||||| ||  |||||||||||||       ||| ||||
  ACCUC UC  CUCGUGCACGUUU       UGU CUCU U
CA     C  CC             -----AA   A    A
Stem-loop sequence UGGAGAAGCAGGGCACGUGCAAACCAACAAACACGAGAUCUAUCUCAUGUAAUUUGCACGUGCUCCCCUCCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013754581.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ||-=||||||||||||||||||
targets:777   UU-UACGUGCCCUGCUUCUCCA   797

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 100 (LOC106316695), mRNA NAC domain-containing protein 100(LOC106316695) coding protein psRNATarget
XM_013740365.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ||-=||||||||||||||||||
targets:897   UU-UACGUGCCCUGCUUCUCCA   917

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 100 (LOC106303998), mRNA NAC domain-containing protein 100(LOC106303998) coding protein psRNATarget
XM_013763086.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ||-=||||||||||||||||||
targets:815   UU-UACGUGCCCUGCUUCUCCA   835

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 100-like (LOC106325060), mRNA NAC domain-containing protein 100-like(LOC106325060) coding protein psRNATarget
XM_013763217.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ***=||||||||||||||||||
targets:780   ACUUACGUGCCCUGCUUCUCCA   801

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 100-like (LOC106325190), mRNA NAC domain-containing protein 100-like(LOC106325190) coding protein psRNATarget
XM_013771044.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  **|||*||||||||||||||||
targets:748   CAGCAAGUGCCCUGCUUCUCCA   769

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 21/22-like (LOC106332572), mRNA NAC domain-containing protein 21/22-like(LOC106332572) coding protein psRNATarget
XM_013728918.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  **|||*||||||||||||||||
targets:748   CAGCAAGUGCCCUGCUUCUCCA   769

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 21/22 (LOC106293262), mRNA NAC domain-containing protein 21/22(LOC106293262) coding protein psRNATarget
XM_013769589.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  **|||*||||||||||||||||
targets:863   GAGCAAGUGCCCUGCUUCUCCA   884

1.0 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 21/22 (LOC106331268), mRNA NAC domain-containing protein 21/22(LOC106331268) coding protein psRNATarget
XM_013729784.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  **|||||||=||||||||||||
targets:625   GAGCACGUGUCCUGCUUCUCCA   646

1.5 PREDICTED: Brassica oleracea var. oleracea protein CUP-SHAPED COTYLEDON 1 (LOC106294200), mRNA protein CUP-SHAPED COTYLEDON 1(LOC106294200) coding protein psRNATarget
XM_013758079.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ***||||||*|||||||||||=
targets:801   ACUCACGUGACCUGCUUCUCCG   822

2.5 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 92 (LOC106319699), mRNA NAC domain-containing protein 92(LOC106319699) coding protein psRNATarget
XM_013734737.1
ncRNA:22   AACGUGCACGGGACGAAGAGGU   1
  ***||||||*|||||||||||=
targets:986   ACUCACGUGACCUGCUUCUCCG   1007

2.5 PREDICTED: Brassica oleracea var. oleracea NAC domain-containing protein 92-like (LOC106298602), mRNA NAC domain-containing protein 92-like(LOC106298602) coding protein psRNATarget