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BaseInfo

ncRNA ID novel_bol_miR143
Species Brassica oleracea
Class miRNA
Genome position ChrC4:7349945-7350157 [+]
Reference genome BOL
Source SRR961925
Length 27
Mature sequence(if miRNA) 187 - AGAACCCCGGGUUAAUCAUGGUCUAUC - 213
Stem-loop(if miRNA) --A   G              A        GA       C  A      C                                                      UA
   AGA CAUGAUUAACCCGG GUUCUUAG  UGGGGUU UU GCGGAA UUAAGAAACUGUUUCUUAAUUUUUAACUAAAAAAGCUAAGAACUGGUUCUUAAA  A
   ||| |||||||||||||| ||||||||  ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  G
   UCU GUACUAAUUGGGCC CAAGAAUC  AUCUCAA AA CGCCUU AAUUCUUUGACAAAGAAUUGAAAAUUGAUUUUUUUGAUUCUUGACCAAGAAUUU  G
CUA   G              C        UC       A  A      C                                                      CA
Stem-loop sequence AAGAGCAUGAUUAACCCGGAGUUCUUAGGAUGGGGUUCUUAGCGGAACUUAAGAAACUGUUUCUUAAUUUUUAACUAAAAAAGCUAAGAACUGGUUCUUAAAUAAGGACUUUAAGAACCAGUUCUUAGUUUUUUUAGUUAAAAGUUAAGAAACAGUUUCUUAACUUCCGCAAAAAACUCUACUCUAAGAACCCCGGGUUAAUCAUGGUCUAUC