ncRNA ID | novel_bol_miR142 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:52880788-52880953 [+] |
Reference genome | BOL |
Source | SRR961925 |
Length | 26 |
Mature sequence(if miRNA) | 141 - CUAAGAACUCCGGAUUAAUCAUAAUC - 166 |
Stem-loop(if miRNA) |
--GC       U    A  -       GA  A                                       AACUAAAAAAAC      C     AUGAUUA UCCG GA UUUUUAG  UG GGUUCUUAGCGGAAGUUAAGAAAUUGUUUCUUAACUUUU            UAAGAA C     ||||||| |||| || |||||||  || |||||||||||||||||||||||||||||||||||||||            ||||||     UACUAAU AGGC CU AAGAAUC  AC CCAAGAAUCGCCUUCAAUUCUUUGACAAAGAAUUGAAAA            AUUCUU G CUAA       U    -  C       UC  C                                       ------------      G |
Stem-loop sequence | GCAUGAUUAUUCCGAGAUUUUUAGGAUGAGGUUCUUAGCGGAAGUUAAGAAAUUGUUUCUUAACUUUUAACUAAAAAAACUAAGAACCGGUUCUUAAAAAGUUAAGAAACAGUUUCUUAACUUCCGCUAAGAACCCCACUCUAAGAACUCCGGAUUAAUCAUAAUC |