ncRNA ID | novel_bol_miR141 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:52642698-52642868 [+] |
Reference genome | BOL |
Source | SRR961925 |
Length | 18 |
Mature sequence(if miRNA) | 1 - AGCGGAAUAUAAGAAAUC - 18 |
Stem-loop(if miRNA) |
--                 C  C                    GG          A                    AUCAUAUAC   AGCGGAAUAUAAGAAAU GU UCUUAACUUUUAACUAAAAA  UUAAGAACCG CUCUUAAAUAUCUUAUUUAA         U   ||||||||||||||||| || ||||||||||||||||||||  |||||||||| ||||||||||||||||||||         A   UCGUCUUAUAUUUUUUG CA AGAAUUGAAAAUUGAUUUUU  GAUUCUUGGU GAGAAUUUAUAGAAUAAAUU         U AA                 A  U                    UU          C                    CUACUUUUG |
Stem-loop sequence | AGCGGAAUAUAAGAAAUCGUCUCUUAACUUUUAACUAAAAAGGUUAAGAACCGACUCUUAAAUAUCUUAUUUAAAUCAUAUACUAUGUUUUCAUCUUAAAUAAGAUAUUUAAGAGCUGGUUCUUAGUUUUUUUAGUUAAAAGUUAAGAUACAGUUUUUUAUAUUCUGCUAA |