ncRNA ID | novel_bol_miR133 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC4:3048443-3048660 [+] |
Reference genome | BOL |
Source | SRR961925;SRR961924 |
Length | 26 |
Mature sequence(if miRNA) | 193 - UGGUUUAGGGUUUAGAGUUGAUGAUC - 218 |
Stem-loop(if miRNA) |
--A               -      -------UU                  -  ------                                  -------              UAGA    CAUCAACUCUAAACC UAAACU         CAACUCUAAACCCUAAAC CU      UCAACUCUAAACCCUAAAUUCUAAACCCUAAACC       CUAAACCCUAAAAU    G    ||||||||||||||| ||||||         |||||||||||||||||| ||      ||||||||||||||||||||||||||||||||||       ||||||||||||||    GUAGUUGAGAUUUGG AUUUGG         GUUGAGAUUUGGGAUUUG GG      AGUUGAGAUUUGGGAUUUGGGAUUUGGGAUUUGG       GAUUUGGGAUUUUG    U CUA               G      UACUUUGUU                  A  CUUUGU                                  AAGUUUA              UAGU |
Stem-loop sequence | ACAUCAACUCUAAACCUAAACUUUCAACUCUAAACCCUAAACCUUCAACUCUAAACCCUAAAUUCUAAACCCUAAACCCUAAACCCUAAAAUUAGAGUUGAUGUUUUAGGGUUUAGAUUUGAAGGUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUGAUGUUUCGGAGUUUAGGGUUUAGAGUUGUUGUUUCAUGGUUUAGGGUUUAGAGUUGAUGAUC |