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BaseInfo

ncRNA ID novel_bol_miR125
Species Brassica oleracea
Class miRNA
Genome position ChrC3:43995322-43995518 [-]
Reference genome BOL
Source SRR961925
Length 26
Mature sequence(if miRNA) 172 - GCUGGACGACUUAGUAGACGACUUAU - 197
Stem-loop(if miRNA) --      C           C             U                         A                           A      AUA
  GCUGGA GACUUAGUAGA GACUUAUAAUUAA UCGUCUGGAAAGUCUUCCAGCUGGA GACUUAGUAGAAGACUUAUAAUUAAGU GUCUGG   G
  |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||   U
  UGACCU CUGAAUCAUCU CUGAAUAUUAAUU AGCAGACUUUUCAGAAGGUCGACUU CUGAAUCAUCUUCUGAAUAUUAAUUCA CAGACC   C
GU      U           U             C                         A                           G      CUU
Stem-loop sequence GCUGGACGACUUAGUAGACGACUUAUAAUUAAUUCGUCUGGAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACUUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCAUUCAGCUGGAAGACUUUUCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCUUCCAGUUG