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BaseInfo

ncRNA ID	novel_bol_miR116
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC3:57349515-57349591 [+]
Reference genome	BOL
Source	SRR961925;SRR961924
Length	20
Mature sequence(if miRNA)	58 - GCAAGUUGACUUUGGCUCUG - 77
Stem-loop(if miRNA)	--         A           UUUUUU   AC     UA   GAGCCAAGG UGACUUGCCGA      CCA  GAAUC  U   ||||||||| |||||||||||      |||  |||||   CUCGGUUUC GUUGAACGGUU      GGU  UUUAG  A GU         A           ---UGU   --     UC
Stem-loop sequence	GAGCCAAGGAUGACUUGCCGAUUUUUUCCAACGAAUCUAUACUGAUUUUGGUGUUUGGCAAGUUGACUUUGGCUCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013762119.1	ncRNA:20   GUCUCGGUUUCAGUUGAACG   1   *|||||||||*||||||||* targets:254   AAGAGCCAAAUUCAACUUGG   273 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106324101 (LOC106324101), mRNA	uncharacterized LOC106324101(LOC106324101)	coding protein	psRNATarget
XM_013760707.1	ncRNA:20   GUCUCGGUUUCAGUUGAACG   1   *||||*||||*||||||||| targets:225   AAGAGGCAAAUUCAACUUGC   244 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea transcription factor MYB34-like (LOC106322626), transcript variant X2, mRNA	transcription factor MYB34-like(LOC106322626)	coding protein	psRNATarget
XM_013760706.1	ncRNA:20   GUCUCGGUUUCAGUUGAACG   1   *||||*||||*||||||||| targets:299   AAGAGGCAAAUUCAACUUGC   318 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea transcription factor MYB34-like (LOC106322626), transcript variant X1, mRNA	transcription factor MYB34-like(LOC106322626)	coding protein	psRNATarget
XM_013770401.1	ncRNA:20   GUCUCGGUUUCAGUUGAACG   1   *||||*||||*||||||||| targets:352   AAGAGGCAAAUUCAACUUGC   371 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea myb-related protein Hv1-like (LOC106331960), mRNA	myb-related protein Hv1-like(LOC106331960)	coding protein	psRNATarget
XM_013751728.1	ncRNA:20   GUCUCGGUUUCAGUUGAACG   1   *||||*||||*||||||||| targets:461   AAGAGGCAAAUUCAACUUGC   480 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea myb-related protein Hv1 (LOC106313816), mRNA	myb-related protein Hv1(LOC106313816)	coding protein	psRNATarget