ncRNA ID | novel_bol_miR114 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC3:6457465-6457669 [+] |
Reference genome | BOL |
Source | SRR961925 |
Length | 24 |
Mature sequence(if miRNA) | 182 - ACUCGAUUUUGCGGUUUCGGCGGG - 205 |
Stem-loop(if miRNA) |
-- A  A   A                  -         ------    AAG           G G     - UA    UA          GA   C    A   C   C CC AAA CGCAAAAUCGAGUUUUUC GUCGAAACU      UCAA   CGAGUUUUCCC U AAAAC G  AAAU  AGUUUUUCUG  AAA CCGU AAA U   | || ||| |||||||||||||||||| |||||||||      ||||   ||||||||||| | ||||| |  ||||  ||||||||||  ||| |||| ||| C   G GG UUU GCGUUUUAGCUCAAAAAG CGGUUUUGA      GGUU   GCUCAAAAGGG G UUUUG C  UUUA  UCAAAAGGAC  UUU GGCA UUU A GG C  C   G                  G         UUUUGG    AUA           A G     G CG    GC          GG   U    C   A |
Stem-loop sequence | CACCAAAAACGCAAAAUCGAGUUUUUCGUCGAAACUUCAAAAGCGAGUUUUCCCGUGAAAACGUAAAAUUAAGUUUUUCUGGAAAACCCGUAAAACUCAAUUUCACGGUUUUGGCAGGAAAACUCGAUUUGCCGGUUUUGGAGGGAAAACUCGAUAUUGGGGUUUUAGUUUUGGCGGAAAAACUCGAUUUUGCGGUUUCGGCGGG |