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BaseInfo

ncRNA ID novel_bol_miR114
Species Brassica oleracea
Class miRNA
Genome position ChrC3:6457465-6457669 [+]
Reference genome BOL
Source SRR961925
Length 24
Mature sequence(if miRNA) 182 - ACUCGAUUUUGCGGUUUCGGCGGG - 205
Stem-loop(if miRNA) -- A  A   A                  -         ------    AAG           G G     - UA    UA          GA   C    A   C
  C CC AAA CGCAAAAUCGAGUUUUUC GUCGAAACU      UCAA   CGAGUUUUCCC U AAAAC G  AAAU  AGUUUUUCUG  AAA CCGU AAA U
  | || ||| |||||||||||||||||| |||||||||      ||||   ||||||||||| | ||||| |  ||||  ||||||||||  ||| |||| ||| C
  G GG UUU GCGUUUUAGCUCAAAAAG CGGUUUUGA      GGUU   GCUCAAAAGGG G UUUUG C  UUUA  UCAAAAGGAC  UUU GGCA UUU A
GG C  C   G                  G         UUUUGG    AUA           A G     G CG    GC          GG   U    C   A
Stem-loop sequence CACCAAAAACGCAAAAUCGAGUUUUUCGUCGAAACUUCAAAAGCGAGUUUUCCCGUGAAAACGUAAAAUUAAGUUUUUCUGGAAAACCCGUAAAACUCAAUUUCACGGUUUUGGCAGGAAAACUCGAUUUGCCGGUUUUGGAGGGAAAACUCGAUAUUGGGGUUUUAGUUUUGGCGGAAAAACUCGAUUUUGCGGUUUCGGCGGG