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BaseInfo

ncRNA ID ath-miRf10696-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUUUGAAAGUAGAUACACUAUCAUC - NA
Stem-loop(if miRNA)          C       G               C  UG   --   A
GAGAGUCAC UUUGAAA UAGAUACACUAUCAU UU  UCC  AUG G
||||||||| ||||||| ||||||||||||||| ||  |||  |||
UUCUCAGUG AAACUUU AUCUAUGUGAUAGUA GA  AGG  UGC A
         A       -               U  GU   CC   A
Stem-loop sequence GAGAGUCACCUUUGAAAGUAGAUACACUAUCAUCUUUGUCCAUGAGAACGUCCGGAUGAGUAUGAUAGUGUAUCUAUUUCAAAAGUGACUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_102745.1
ncRNA:25   CUACUAUCACAUAGAUGAAAGUUUC   1
  |||||||||||||||=|||||||||
targets:79   GAUGAUAGUGUAUCUGCUUUCAAAG   103

1.5 Arabidopsis thaliana COP1-interacting protein-like protein partial mRNA COP1-interacting protein-like protein(AT1G30060) coding protein psRNATarget
NM_116319.1
ncRNA:25   CUACUAUCACAUAGAUGAAAGUUUC   1
  |||||||*|||*|||||||||||||
targets:94   GAUGAUAUUGUUUCUACUUUCAAAG   118

2.0 Arabidopsis thaliana COP1-interacting protein-like protein partial mRNA COP1-interacting protein-like protein(AT4G00920) coding protein psRNATarget
DQ056636.1
ncRNA:25   CUACUAUCACAUAGAUGAAAGUUUC   1
  |||||||*|||*|||||||||||||
targets:94   GAUGAUAUUGUUUCUACUUUCAAAG   118

2.0 Arabidopsis thaliana COP1-interacting protein-related (At4g00920) mRNA, complete cds NA coding protein psRNATarget
NM_001335141.1
ncRNA:25   CUACUAUCACAUAGAUGAAAGUUUC   1
  |||||||*|||||||||*|||||||
targets:76   GAUGAUACUGUAUCUACAUUCAAAG   100

2.5 Arabidopsis thaliana 4'-phosphopantetheinyl transferase domain protein partial mRNA 4'-phosphopantetheinyl transferase domain protein(AT2G02770) coding protein psRNATarget