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BaseInfo

ncRNA ID ath-miRf10694-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACGCUCCUCUGGUUUGAGAUC - NA
Stem-loop(if miRNA)      -  G      U G   GAG       AGAC
AGACC AC CUCCUC G UUU   AUCUUUG    A
||||| || |||||| | |||   |||||||    A
UCUGG UG GAGGAG C AAG   UAGAGGC    U
     C  A      - G   AAG       AAAG
Stem-loop sequence AGACCACGCUCCUCUGGUUUGAGAUCUUUGAGACAAUGAAACGGAGAUGAAGAAGCGAGGAGAGUCGGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY091260.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:130   GAUCUCAAACCAGAGGAGCGU   150

0.0 Arabidopsis thaliana putative scarecrow 3 protein (At1g50420) mRNA, complete cds NA coding protein psRNATarget
BX816229.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:146   GAUCUCAAACCAGAGGAGCGU   166

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX814832.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:325   GAUCUCAAACCAGAGGAGCGU   345

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY056154.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:329   GAUCUCAAACCAGAGGAGCGU   349

0.0 Arabidopsis thaliana putative scarecrow 3 protein (At1g50420) mRNA, complete cds NA coding protein psRNATarget
BX815261.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:315   GAUCUCAAACCAGAGGAGCGU   335

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_103925.6
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||||||||||||||||
targets:564   GAUCUCAAACCAGAGGAGCGU   584

0.0 Arabidopsis thaliana scarecrow-like 3 (SCL3), mRNA scarecrow-like 3(SCL3) coding protein psRNATarget
BX815122.1
ncRNA:21   CUAGAGUUUGGUCUCCUCGCA   1
  |||||||=|||||||||||||
targets:320   GAUCUCAGACCAGAGGAGCGU   340

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS35ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget