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BaseInfo

ncRNA ID novel_bol_miR92
Species Brassica oleracea
Class miRNA
Genome position ChrC2:42152786-42152983 [-]
Reference genome BOL
Source SRR961925
Length 27
Mature sequence(if miRNA) 1 - GGGUUCUUAGAGACCUGUUCUUGGAUC - 27
Stem-loop(if miRNA) --     A     A      -          A                                          -U      --C   A       GAACA
  UCCAA AACAG UCUCUA GAACCCUAAA GUUCUUUGAUCGACCGUUCAACAUAUUUGUUCGCUGCAUCAG  UGGUAU   AGA CCAGGUU     A
  ||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||   ||| |||||||
  AGGUU UUGUC AGAGAU CUUGGGAUUU CAAGAAACUAGCUGGCAAGUUGUAUAAACAGGCGACGUAGUC  ACCAUA   UCU GGUCCAA     U
CU     C     C      U          C                                          CC      UAA   C       GGAAC
Stem-loop sequence UCCAAAAACAGAUCUCUAGAACCCUAAAAGUUCUUUGAUCGACCGUUCAACAUAUUUGUUCGCUGCAUCAGUUGGUAUCAGAACCAGGUUGAACAAUCAAGGAACCUGGCUCUAAUAUACCACCCUGAUGCAGCGGACAAAUAUGUUGAACGGUCGAUCAAAGAACCUUUAGGGUUCUUAGAGACCUGUUCUUGGAUC