ncRNA ID | novel_bol_miR85 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC2:44899811-44899958 [+] |
Reference genome | BOL |
Source | SRR961925;SRR961924 |
Length | 27 |
Mature sequence(if miRNA) | 122 - GCUACGUAGCGACCGAGCGGAACGAUC - 148 |
Stem-loop(if miRNA) |
--A  -AG                           C UG   UG  -       A        G        AGG    CG   CGCUCGGUCGCUAUGUAGCGACCGAGC U  GGU  AG CUUGGUC CUACGUAG GACCGAGC   A    ||   ||||||||||||||||||||||||||| |  |||  || ||||||| |||||||| ||||||||   C    GC   GCGAGCCAGCGAUGCAUCGCUGGCUCG A  UCG  UC GAACCAG GAUGCAUC CUGGCUCG   G CUA  AAG                           - GU   GU  C       A        G        CUA |
Stem-loop sequence | ACGAGCGCUCGGUCGCUAUGUAGCGACCGAGCCUUGGGUUGAGCUUGGUCACUACGUAGGGACCGAGCAGGACGAUCGCUCGGUCGCUACGUAGAGACCAAGCCUUGGCUUGAGCUCGGUCGCUACGUAGCGACCGAGCGGAACGAUC |