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BaseInfo

ncRNA ID ath-miRf10693-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGUACAUCACUUUUAGUGU - NA
Stem-loop(if miRNA)                                     AUAUA     -A   A
UACACUUGGAUUGUACAUCACUUUUAGUGUACAAAU     UAAAA  UAC C
||||||||||||||||||||||||||||||||||||     |||||  ||| A
AUGUGAACCUAACAUGUAGUGAAAAUCACAUGUUUA     AUUUU  AUG G
                                    ----C     AC   C
Stem-loop sequence UACACUUGGAUUGUACAUCACUUUUAGUGUACAAAUAUAUAUAAAAAUACACAGCGUACAUUUUACAUUUGUACACUAAAAGUGAUGUACAAUCCAAGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX813709.1
ncRNA:20   UGUGAUUUUCACUACAUGUU   1
  ||||||||||||*|||||||
targets:1804   ACACUAAAAGUGUUGUACAA   1823

1.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_001334229.1
ncRNA:20   UGUGAUUUUCACUACAUGUU   1
  ||||||||||||*|||||||
targets:2104   ACACUAAAAGUGUUGUACAA   2123

1.5 Arabidopsis thaliana glutamate decarboxylase 2 (GAD2), partial mRNA glutamate decarboxylase 2(GAD2) coding protein psRNATarget
BT029363.1
ncRNA:20   UGUGAUUUUCACUACAUGUU   1
  ||||||=||||||||||||=
targets:341   ACACUAGAAGUGAUGUACAG   360

2.0 Arabidopsis thaliana At1g09030 mRNA, complete cds NA coding protein psRNATarget
NM_100774.2
ncRNA:20   UGUGAUUUUCACUACAUGUU   1
  ||||||=||||||||||||=
targets:343   ACACUAGAAGUGAUGUACAG   362

2.0 Arabidopsis thaliana nuclear factor Y, subunit B4 (NF-YB4), partial mRNA nuclear factor Y, subunit B4(NF-YB4) coding protein psRNATarget
NM_117297.2
ncRNA:20   UGUGAUUUUCACUACAUGUU   1
  ||||**=|||||||||||||
targets:1094   ACACGUGAAGUGAUGUACAA   1113

3.0 Arabidopsis thaliana Copper amine oxidase family protein partial mRNA Copper amine oxidase family protein(AT4G12270) coding protein psRNATarget