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BaseInfo

ncRNA ID novel_bol_miR78
Species Brassica oleracea
Class miRNA
Genome position ChrC9:10138835-10139000 [-]
Reference genome BOL
Source SRR961924
Length 26
Mature sequence(if miRNA) 1 - AUAGAGGAACACAUUGGAGCAAAAAC - 26
Stem-loop(if miRNA) --                              A    A       UG    C         GA                   U
  UUUUGCUCUAAUGUGUUCCUCUAUAAUAGA AAAU CUAUAUU  UCUC AUAAAUAGA  AAUGCUAUUUUUUUUUCUA A
  |||||||||||||||||||||||||||||| |||| |||||||  |||| |||||||||  |||||||||||||||||||
  AAAACGAGGUUACACAAGGAGAUAUUAUCU UUUA GAUAUAA  GGAG UAUUUAUCU  UUACGAUAAAAAAAAGGAU U
CA                              C    C       GU    A         AC                   U
Stem-loop sequence UUUUGCUCUAAUGUGUUCCUCUAUAAUAGAAAAAUACUAUAUUUGUCUCCAUAAAUAGAGAAAUGCUAUUUUUUUUUCUAUAUUUAGGAAAAAAAAUAGCAUUCAUCUAUUUAUAGAGGUGAAUAUAGCAUUUCUCUAUUAUAGAGGAACACAUUGGAGCAAAAAC