ncRNA ID | novel_bol_miR74 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC9:37406498-37406602 [-] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 21 |
Mature sequence(if miRNA) | 85 - AACGGAAUAUAAGAACUCAUC - 105 |
Stem-loop(if miRNA) |
--AA             CU AUC      C      C    U   G      C     CGGAAUAUAAGAA  C   UCUUAA UUUUAA UAAA AAG UAAGAA U     |||||||||||||  |   |||||| |||||| |||| ||| ||||||     GCCUUAUAUUCUU  G   AGAAUU AAAAUU AUUU UUC AUUCUU G AAUC             AG CAA      A      A    -   G      G |
Stem-loop sequence | AACGGAAUAUAAGAACUCAUCUCUUAACUUUUAACUAAAUAAGGUAAGAACUGGUUCUUAGCUUUUUAAUUAAAAAUUAAGAAACGGAUUCUUAUAUUCCGCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013731104.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea flavonol synthase/flavanone 3-hydroxylase-like (LOC106295251), mRNA | flavonol synthase/flavanone 3-hydroxylase-like(LOC106295251) | coding protein | psRNATarget |