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BaseInfo

ncRNA ID novel_bol_miR74
Species Brassica oleracea
Class miRNA
Genome position ChrC9:37406498-37406602 [-]
Reference genome BOL
Source SRR961924;SRR961925
Length 21
Mature sequence(if miRNA) 85 - AACGGAAUAUAAGAACUCAUC - 105
Stem-loop(if miRNA) --AA             CU AUC      C      C    U   G      C
    CGGAAUAUAAGAA  C   UCUUAA UUUUAA UAAA AAG UAAGAA U
    |||||||||||||  |   |||||| |||||| |||| ||| ||||||
    GCCUUAUAUUCUU  G   AGAAUU AAAAUU AUUU UUC AUUCUU G
AAUC             AG CAA      A      A    -   G      G
Stem-loop sequence AACGGAAUAUAAGAACUCAUCUCUUAACUUUUAACUAAAUAAGGUAAGAACUGGUUCUUAGCUUUUUAAUUAAAAAUUAAGAAACGGAUUCUUAUAUUCCGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013731104.1
ncRNA:21   CUACUCAAGAAUAUAAGGCAA   1
  **|||*|||||||||||*|||
targets:1270   AUUGAUUUCUUAUAUUCGGUU   1290

2.5 PREDICTED: Brassica oleracea var. oleracea flavonol synthase/flavanone 3-hydroxylase-like (LOC106295251), mRNA flavonol synthase/flavanone 3-hydroxylase-like(LOC106295251) coding protein psRNATarget