ncRNA ID | novel_bol_miR72 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC9:40950535-40950741 [-] |
Reference genome | BOL |
Source | SRR961924 |
Length | 26 |
Mature sequence(if miRNA) | 1 - UGGUUUAGGGUUUAGAGUUGAUGAUC - 26 |
Stem-loop(if miRNA) |
--A                      - U    CU             -AU    UCUA   -G       C             -------             GU   G    CAUCAACUCUAAACCCUAAACC C AAAC  UCAACUCUAAACC   AAAC    AAC  CUAAAUC UAAACCGUAAGCC       CUAAACCCUAAAA  UUA A    |||||||||||||||||||||| | ||||  |||||||||||||   ||||    |||  ||||||| |||||||||||||       |||||||||||||  |||    GUAGUUGAGAUUUGGGAUUUGG G UUUG  AGUUGAGAUUUGG   UUUG    UUG  GAUUUGG AUUUGGUAUUUGG       GAUUUGGGAUUUU  AGU G CUA                      U C    -U             GGC    --UA   GA       A             AAGUUUA             GU   U |
Stem-loop sequence | ACAUCAACUCUAAACCCUAAACCCUAAACCUUCAACUCUAAACCAUAAACUCUAAACGCUAAAUCCUAAACCGUAAGCCCUAAACCCUAAAAGUUUAGAGUUGAUGUUUUAGGGUUUAGAUUUGAAGGUUUAUGGUUUAAGGUUUAGAGGUUAUGUUUCGGGGUUUAGAGUUGAUGUUUCGUGGUUUAGGGUUUAGAGUUGAUGAUC |