Search result

BaseInfo

ncRNA ID	novel_bol_miR71
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC9:41569865-41569911 [-]
Reference genome	BOL
Source	SRR961924
Length	20
Mature sequence(if miRNA)	1 - UCAGAACCAGAAGAAUGAUC - 20
Stem-loop(if miRNA)	-- UG    CAA     GAAUA  UG   U  UUCU   UUGGU     UG  G   |  ||||   |||||     ||   A  AAGA   GACCA     AC  U CU GU    --A     ---AG  UU
Stem-loop sequence	UUGUUCUCAAUUGGUGAAUAUGUGGUUUCAGAACCAGAAGAAUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013751558.1	ncRNA:20   CUAGUAAGAAGACCAAGACU   1   **|||||||||||||||||= targets:1559   CUUCAUUCUUCUGGUUCUGG   1578 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea MLO-like protein 11 (LOC106313674), mRNA	MLO-like protein 11(LOC106313674)	coding protein	psRNATarget
XM_013750359.1	ncRNA:20   CUAGUAAGAAGACCAAGACU   1   |||*||*||||||||||||* targets:1004   GAUGAUACUUCUGGUUCUGU   1023 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea wings apart-like protein homolog (LOC106312736), mRNA	wings apart-like protein homolog(LOC106312736)	coding protein	psRNATarget
XM_013731619.1	ncRNA:20   CUAGUAAGAAGACCAAGACU   1   |||*||*||||||||||||* targets:1007   GAUGAUACUUCUGGUUCUGU   1026 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea uncharacterized LOC106295653 (LOC106295653), mRNA	uncharacterized LOC106295653(LOC106295653)	coding protein	psRNATarget