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BaseInfo

ncRNA ID novel_bol_miR67
Species Brassica oleracea
Class miRNA
Genome position ChrC2:26611273-26611484 [+]
Reference genome BOL
Source SRR961924;SRR961925
Length 25
Mature sequence(if miRNA) 1 - AGGAUUUAGGGUUUAGGGUUUAGAA - 25
Stem-loop(if miRNA) AGGAUU    G      G      A      G      G      G      G      G      G      G      G      G      G      G     
      UAGG UUUAGG UUUAGA UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG
      |||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||G
      AUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU
-----G    G      G      G      G      G      G      G      G      G      G      G      G      G      G     
Stem-loop sequence AGGAUUUAGGGUUUAGGGUUUAGAAUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013763865.1
ncRNA:25   AAGAUUUGGGAUUUGGGAUUUAGGA   1
  *****||||||||||=|||||||||
targets:58   AGAACAACCCUAAACUCUAAAUCCU   82

1.5 PREDICTED: Brassica oleracea var. oleracea ethylene-responsive transcription factor ERF114-like (LOC106325815), mRNA ethylene-responsive transcription factor ERF114-like(LOC106325815) coding protein psRNATarget