ncRNA ID | novel_bol_miR67 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC2:26611273-26611484 [+] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AGGAUUUAGGGUUUAGGGUUUAGAA - 25 |
Stem-loop(if miRNA) |
AGGAUU    G      G      A      G      G      G      G      G      G      G      G      G      G      G            UAGG UUUAGG UUUAGA UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG UUUAGG UUUAGA UUUAGG       |||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||G       AUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU GGAUUU AGAUUU GGAUUU -----G    G      G      G      G      G      G      G      G      G      G      G      G      G      G      |
Stem-loop sequence | AGGAUUUAGGGUUUAGGGUUUAGAAUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUUAGGGUUUAGAGUUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013763865.1 |
|
1.5 | PREDICTED: Brassica oleracea var. oleracea ethylene-responsive transcription factor ERF114-like (LOC106325815), mRNA | ethylene-responsive transcription factor ERF114-like(LOC106325815) | coding protein | psRNATarget |