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BaseInfo

ncRNA ID	novel_bol_miR64
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC9:45728763-45728830 [+]
Reference genome	BOL
Source	SRR961924
Length	25
Mature sequence(if miRNA)	1 - AACUAAAAAAACUAAGAACCGGCUA - 25
Stem-loop(if miRNA)	--          A        C G  A     UA   AACUAAAAAA CUAAGAAC G CU UUAAA  A   |||||||||| |||||||| | || |||||  G   UUGAUUUUUU GAUUCUUG C GA AAUUU  A AA          -        A A  G     UG
Stem-loop sequence	AACUAAAAAAACUAAGAACCGGCUAUUAAAUAAGAGUUUUAAGAGACAGUUCUUAGUUUUUUAGUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013748874.1	ncRNA:25   AUC--GGCCAAGAAUCAAAAAAAUCAA   1   *||--|=|||||||||||||||||||| targets:226   AAGAACUGGUUCUUAGUUUUUUUAGUU   252 Target Full Sequence	0.0	PREDICTED: Brassica oleracea var. oleracea small nuclear ribonucleoprotein Sm D2-like (LOC106311637), transcript variant X1, mRNA	small nuclear ribonucleoprotein Sm D2-like(LOC106311637)	coding protein	psRNATarget
XM_013748875.1	ncRNA:25   AUC--GGCCAAGAAUCAAAAAAAUCAA   1   *||--|=|||||||||||||||||||| targets:226   AAGAACUGGUUCUUAGUUUUUUUAGUU   252 Target Full Sequence	0.0	PREDICTED: Brassica oleracea var. oleracea small nuclear ribonucleoprotein Sm D2-like (LOC106311637), transcript variant X2, mRNA	small nuclear ribonucleoprotein Sm D2-like(LOC106311637)	coding protein	psRNATarget
XM_013754275.1	ncRNA:25   AUCGGCCAAGAAUCAAAAAAAUCAA   1   |||**||||||||||||*||||||| targets:1228   UAGAGGGUUCUUAGUUUCUUUAGUU   1252 Target Full Sequence	1.5	PREDICTED: Brassica oleracea var. oleracea putative auxin efflux carrier component 8 (LOC106316397), mRNA	putative auxin efflux carrier component 8(LOC106316397)	coding protein	psRNATarget