ncRNA ID | novel_bol_miR63 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC9:42852943-42853118 [+] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCGGACCUCACUGACUCGUGGCGG - 24 |
Stem-loop(if miRNA) |
--GC  A          U     C  C              CU    A        -   ----UU          ----------AAA            GG CCUCACUGAC CGUGG GG CCGCGAUUGGUUUG  UUUA UUUUUUUU GAG      UCUUAGGGAU             CAUGGUCU     || |||||||||| ||||| || ||||||||||||||  |||| |||||||| |||      ||||||||||             |||||||U     CC GGGGUGGCUG GCACC CC GGCGCUAACCAAAU  AAAU AAAAAAAA CUU      GGAAUUCCUG             GUACCAGA AAUA  C          U     A  A              --    A        U   UUUUUU          GGGAACGUUAUUA        |
Stem-loop sequence | GCGGACCUCACUGACUCGUGGCGGCCCGCGAUUGGUUUGCUUUUAAUUUUUUUUGAGUUUCUUAGGGAUAAACAUGGUCUUAGACCAUGAUUAUUGCAAGGGGUCCUUAAGGUUUUUUUUCUAAAAAAAAAUAAAUAAACCAAUCGCGGACCACCACGUGUCGGUGGGGCCCAUAA |