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BaseInfo

ncRNA ID novel_bol_miR63
Species Brassica oleracea
Class miRNA
Genome position ChrC9:42852943-42853118 [+]
Reference genome BOL
Source SRR961924;SRR961925
Length 24
Mature sequence(if miRNA) 1 - GCGGACCUCACUGACUCGUGGCGG - 24
Stem-loop(if miRNA) --GC  A          U     C  C              CU    A        -   ----UU          ----------AAA       
    GG CCUCACUGAC CGUGG GG CCGCGAUUGGUUUG  UUUA UUUUUUUU GAG      UCUUAGGGAU             CAUGGUCU
    || |||||||||| ||||| || ||||||||||||||  |||| |||||||| |||      ||||||||||             |||||||U
    CC GGGGUGGCUG GCACC CC GGCGCUAACCAAAU  AAAU AAAAAAAA CUU      GGAAUUCCUG             GUACCAGA
AAUA  C          U     A  A              --    A        U   UUUUUU          GGGAACGUUAUUA       
Stem-loop sequence GCGGACCUCACUGACUCGUGGCGGCCCGCGAUUGGUUUGCUUUUAAUUUUUUUUGAGUUUCUUAGGGAUAAACAUGGUCUUAGACCAUGAUUAUUGCAAGGGGUCCUUAAGGUUUUUUUUCUAAAAAAAAAUAAAUAAACCAAUCGCGGACCACCACGUGUCGGUGGGGCCCAUAA