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BaseInfo

ncRNA ID	novel_bol_miR60
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC9:28069449-28069617 [+]
Reference genome	BOL
Source	SRR961924;SRR961925
Length	21
Mature sequence(if miRNA)	149 - UUGGACUGAAGGGAACUCCCU - 169
Stem-loop(if miRNA)	--A          A      U  A  UGU  U     --        U  -    A AC     C     CU  C     -  --  AA    GAGUUUCCUU AGUCCA UC CA   UG GAUUU  GAUCCAAU AG CUCC G  UCAUU ACUCA  UA CGAGU CA  CU  A    |||||||||| |||||| || ||   || |||||  |||||||| || |||| |  ||||| |||||  || ||||| ||  ||    CUCAAGGGAA UCAGGU AG GU   AC UUAGA  CUAGGUUA UC GAGG C  AGUAA UGAGU  AU GCUCA GU  GG  A UCC          G      U  C  --U  -     UU        U  A    G GU     A     AC  U     A  UA  AU
Stem-loop sequence	AGAGUUUCCUUAAGUCCAUUCACAUGUUGUGAUUUGAUCCAAUUAGCUCCAGACUCAUUCACUCACUUACCGAGUCACUAAAAUAGGAUUGAACUCGUUACAUGAGUAAAUGAUGCGGGAGACUUAUUGGAUCUUAGAUUCAUUGCGAUUGGACUGAAGGGAACUCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013781968.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1352   ACGGGGUACCCUUCAGUCCAG   1372 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea transcription factor TCP10 (LOC106342905), transcript variant X3, mRNA	transcription factor TCP10(LOC106342905)	coding protein	psRNATarget
XM_013781969.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1352   ACGGGGUACCCUUCAGUCCAG   1372 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea transcription factor TCP10 (LOC106342905), transcript variant X4, mRNA	transcription factor TCP10(LOC106342905)	coding protein	psRNATarget
XM_013781967.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1350   ACGGGGUACCCUUCAGUCCAG   1370 Target Full Sequence	3.0	PREDICTED: Brassica oleracea var. oleracea transcription factor TCP10 (LOC106342905), transcript variant X2, mRNA	transcription factor TCP10(LOC106342905)	coding protein	psRNATarget