ncRNA ID | novel_bol_miR56 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC9:21647917-21648089 [+] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 19 |
Mature sequence(if miRNA) | 155 - UCGGUAUAUUCCGAGGAUC - 173 |
Stem-loop(if miRNA) |
--  G                  CUC         A  UUUCCGAGGGCUCCGUUCCUCAAAAAUUCCCGAUGAAAAUUCUGAGAAA   UC UCGGAAUAUACCGAGGGA   CUUCCUCGG AC                                                 C   || ||||||||||||||||||   ||||||||| ||   AG AGCCUUAUAUGGCUCCCU   GAAGGAGCC CU                                                 A CU  G                  CUU         -  AUAAAGCUGCCUGAAAGGCUACCAGGUUAGGAGCCUUCAAGGCUGCUUU |
Stem-loop sequence | UCGUCGGAAUAUACCGAGGGACUCCUUCCUCGGAACUUUCCGAGGGCUCCGUUCCUCAAAAAUUCCCGAUGAAAAUUCUGAGAAACAUUUCGUCGGAACUUCCGAGGAUUGGACCAUCGGAAAGUCCGUCGAAAUAUCCCGAGGAAGUUCUCCCUCGGUAUAUUCCGAGGAUC |