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BaseInfo

ncRNA ID novel_bol_miR55
Species Brassica oleracea
Class miRNA
Genome position ChrC9:19273401-19273538 [+]
Reference genome BOL
Source SRR961924
Length 26
Mature sequence(if miRNA) 113 - AGAGGAACUCUAUUAUAGAUGCAUAC - 138
Stem-loop(if miRNA) --    U               G       -   AA   A         AAUCA  C      C     U
  AUGC UUUAUAAUAGAGUUC UCUAUUU UAA  GAA AUAUAGAGG     UA UUUUUA CUCUA A
  |||| ||||||||||||||| ||||||| |||  ||| |||||||||     || |||||| |||||
  UACG AGAUAUUAUCUCAAG AGAUAAG AUU  CUU UAUAUCUCU     AU AAAAGU GAGAU U
CA    U               G       U   CC   G         AAACG  -      A     U
Stem-loop sequence AUGCUUUUAUAAUAGAGUUCGUCUAUUUUAAAAGAAAAUAUAGAGGAAUCAUACUUUUUACCUCUAUAUUUAGAGAUGAAAAUAGCAAAUCUCUAUAUGUUCCCUUAUGAAUAGAGGAACUCUAUUAUAGAUGCAUAC