ncRNA ID | novel_bol_miR55 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC9:19273401-19273538 [+] |
Reference genome | BOL |
Source | SRR961924 |
Length | 26 |
Mature sequence(if miRNA) | 113 - AGAGGAACUCUAUUAUAGAUGCAUAC - 138 |
Stem-loop(if miRNA) |
--    U               G       -   AA   A         AAUCA  C      C     U   AUGC UUUAUAAUAGAGUUC UCUAUUU UAA  GAA AUAUAGAGG     UA UUUUUA CUCUA A   |||| ||||||||||||||| ||||||| |||  ||| |||||||||     || |||||| |||||   UACG AGAUAUUAUCUCAAG AGAUAAG AUU  CUU UAUAUCUCU     AU AAAAGU GAGAU U CA    U               G       U   CC   G         AAACG  -      A     U |
Stem-loop sequence | AUGCUUUUAUAAUAGAGUUCGUCUAUUUUAAAAGAAAAUAUAGAGGAAUCAUACUUUUUACCUCUAUAUUUAGAGAUGAAAAUAGCAAAUCUCUAUAUGUUCCCUUAUGAAUAGAGGAACUCUAUUAUAGAUGCAUAC |