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BaseInfo

ncRNA ID novel_bol_miR43
Species Brassica oleracea
Class miRNA
Genome position ChrC8:34448062-34448259 [+]
Reference genome BOL
Source SRR961924
Length 27
Mature sequence(if miRNA) 172 - AGGGUUUAGGGUUUAGAGUUUAGGAUC - 198
Stem-loop(if miRNA) ---------          -      AAAAC        A           CG     UA  AAUCCAAACCUCAAAUCCUAACUUUAAACUCUAAAAAAACAA
         CUCUGAACUC AAACUC     CCUAAAUU UGAACCCGAAC  UAGAC  UG                                          U
         |||||||||| ||||||     |||||||| |||||||||||  |||||  ||
         GAGAUUUGGG UUUGGG     GGAUUUAG AUUUGGGUUUG  AUUUG  AG                                          A
CUAGGAUUU          A      AUCUA        A           AG     --  UUUAGGAUUUGGGAUUUGGGAUUUACAAACCUAAUUACAACU
Stem-loop sequence CUCUGAACUCAAACUCAAAACCCUAAAUUAUGAACCCGAACCGUAGACUAUGAAUCCAAACCUCAAAUCCUAACUUUAAACUCUAAAAAAACAAUAUCAACAUUAAUCCAAACAUUUAGGGUUUAGGGUUUAGGAUUUGAGUUUAGAGUUUGGGUUUAAGAUUUAGGAUCUAGGGUUUAGGGUUUAGAGUUUAGGAUC