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BaseInfo

ncRNA ID novel_bol_miR42
Species Brassica oleracea
Class miRNA
Genome position ChrC8:19682849-19682981 [+]
Reference genome BOL
Source SRR961924
Length 23
Mature sequence(if miRNA) 1 - AGCGGAAUAUAAGAACAUGUCUC - 23
Stem-loop(if miRNA) --                A                           U                 AA
  AGCGGAAUAUAAGAAC UGUCUCUUAACUUUUAACUAAAAAAGU AAGAACCGGUUUUUAAA  A
  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  C
  UCGCCUUAUAUUCUUG GCAGAGAAUUGAAAAUUGAUUUUUUCG UUCUUGGCCGAGAAUUU  U
AA                G                           U                 AU
Stem-loop sequence AGCGGAAUAUAAGAACAUGUCUCUUAACUUUUAACUAAAAAAGUUAAGAACCGGUUUUUAAAAAACUUAUUUAAGAGCCGGUUCUUUGCUUUUUUAGUUAAAAGUUAAGAGACGGGUUCUUAUAUUCCGCUAA