ncRNA ID | novel_bol_miR32 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC7:23152957-23153037 [-] |
Reference genome | BOL |
Source | SRR961924 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGCAUUGGUAGUAAUGAGUGUUC - 24 |
Stem-loop(if miRNA) |
--C          C     A        CCA     U   U    CACUCAUUAC AUCAA GCCACGUA   UGUUC GUU U    |||||||||| ||||| ||||||||   ||||| |||    GUGAGUAAUG UGGUU CGGUGCAU   AUAAG CAA C CUU          A     A        AAC     -   A |
Stem-loop sequence | CCACUCAUUACCAUCAAAGCCACGUACCAUGUUCUGUUUUCAAACGAAUACAAUACGUGGCAUUGGUAGUAAUGAGUGUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013749588.1 |
|
2.5 | PREDICTED: Brassica oleracea var. oleracea probable RNA-dependent RNA polymerase 5 (LOC106312177), mRNA | probable RNA-dependent RNA polymerase 5(LOC106312177) | coding protein | psRNATarget |