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BaseInfo

ncRNA ID	novel_bol_miR30
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC7:25291575-25291680 [-]
Reference genome	BOL
Source	SRR961924;SRR961925
Length	23
Mature sequence(if miRNA)	1 - UCGGACCAGGCUUCAUUCCCCUC - 23
Stem-loop(if miRNA)	--  U      U      CU   G C   --------   A   G     UG G  G   GG GGAUGA GCUUGG  CGA A CAU        UCA UAU AUCAU  U AU A   || |||||| ||||||  ||| | |||        ||| ||| |||||  | ||   CC CUUACU CGGACC  GCU U GUA        AGU AUA UAGUA  A UA U CU  C      U      AG   G A   AUAGUAAU   A   G     GU G  G
Stem-loop sequence	GGUGGAUGAUGCUUGGCUCGAGACCAUUCAAUAUGAUCAUUGUGAUGAUGAUGAUGAUGAUGAUAAUGAUAAUGAUAAUGAUGUCGGACCAGGCUUCAUUCCCCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013732033.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   ||**||=|||||||||||||||= targets:637   GAUUGGGAUGAAGCCUGGUCCGG   659 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-9 (LOC106295996), transcript variant X2, mRNA	homeobox-leucine zipper protein ATHB-9(LOC106295996)	coding protein	psRNATarget
XM_013732032.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   ||**||=|||||||||||||||= targets:765   GAUUGGGAUGAAGCCUGGUCCGG   787 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-9 (LOC106295996), transcript variant X1, mRNA	homeobox-leucine zipper protein ATHB-9(LOC106295996)	coding protein	psRNATarget
XM_013781810.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   ||**||=|||||||||||||||= targets:899   GAUUGGGAUGAAGCCUGGUCCGG   921 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106342776), transcript variant X2, mRNA	homeobox-leucine zipper protein ATHB-14(LOC106342776)	coding protein	psRNATarget
XM_013781809.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   ||**||=|||||||||||||||= targets:899   GAUUGGGAUGAAGCCUGGUCCGG   921 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106342776), transcript variant X1, mRNA	homeobox-leucine zipper protein ATHB-14(LOC106342776)	coding protein	psRNATarget
XM_013766861.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   |***||=|||||||||||||||= targets:963   GCCUGGGAUGAAGCCUGGUCCGG   985 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-8 (LOC106328424), mRNA	homeobox-leucine zipper protein ATHB-8(LOC106328424)	coding protein	psRNATarget
XM_013782140.1	ncRNA:23   CUCCCCUUACUUCGGACCAGGCU   1   ||**||*|||||||||||||||= targets:1058   GAUUGGUAUGAAGCCUGGUCCGG   1080 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea homeobox-leucine zipper protein ATHB-14 (LOC106343033), mRNA	homeobox-leucine zipper protein ATHB-14(LOC106343033)	coding protein	psRNATarget