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BaseInfo

ncRNA ID	ath-miRf10687-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UUAGCUGAAGAAGCAGAGGAG - NA
Stem-loop(if miRNA)	---G      U    -AA        G -CGG     G    CA UCA UUUGUUU    UUUAGC GAAG   GCAGAGGA U    CAUUG GGCA  G   C |||||||    |||||| ||||   |||||||| |    ||||| ||||  | AGAUAAG    GAGUCG UUUC   CGUCUCCU A    GUAAC UCGU  C   U        GAUA      U    AUA        G AUGG     G    AG UAC
Stem-loop sequence	UUUGUUUGUUUAGCUGAAGAAGCAGAGGAGUCGGCAUUGGGGCACAGUCACUCAUCGAUGCUGCAAUGGGUAAGUCCUCUGCAUACUUUUGCUGAGAUAGGAAUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_127441.4	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   **|||||*||||||||||||= targets:99   GCCCUCUUCUUCUUCAGCUAG   119 Target Full Sequence	2.0	Arabidopsis thaliana SET domain-containing protein mRNA	SET domain-containing protein(AT2G18850)	coding protein	psRNATarget
NM_102508.3	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   ||=||||||||||||*||||| targets:321   CUUCUCUGCUUCUUCCGCUAA   341 Target Full Sequence	2.5	Arabidopsis thaliana Exostosin family protein (GUT2), mRNA	Exostosin family protein(GUT2)	coding protein	psRNATarget
BX814611.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   ||=||||||||||||*||||| targets:207   CUUCUCUGCUUCUUCCGCUAA   227 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT022053.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   ||=||||||||||||*||||| targets:162   CUUCUCUGCUUCUUCCGCUAA   182 Target Full Sequence	2.5	Arabidopsis thaliana At1g27440 gene, complete cds	NA	coding protein	psRNATarget
BT025555.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   ||=||||||||||||*||||| targets:45   CUUCUCUGCUUCUUCCGCUAA   65 Target Full Sequence	2.5	Arabidopsis thaliana At1g27440 mRNA, complete cds	NA	coding protein	psRNATarget
KJ138982.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   ||=||||||||||||*||||| targets:45   CUUCUCUGCUUCUUCCGCUAA   65 Target Full Sequence	2.5	Arabidopsis thaliana glycosyltransferase (AT1G27440) mRNA, partial cds	NA	coding protein	psRNATarget
NM_120575.3	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   *||||*|||||||||||=||| targets:2400   AUCCUGUGCUUCUUCAGUUAA   2420 Target Full Sequence	2.5	Arabidopsis thaliana aminophospholipid ATPase 1 (ALA1), mRNA	aminophospholipid ATPase 1(ALA1)	coding protein	psRNATarget
AK228741.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   *||||*|||||||||||=||| targets:2166   AUCCUGUGCUUCUUCAGUUAA   2186 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for ATPase, complete cds, clone: RAFL16-07-K12	NA	coding protein	psRNATarget
AF175769.1	ncRNA:21   GAGGAGACGAAGAAGUCGAUU   1   *||||*|||||||||||=||| targets:1604   AUCCUGUGCUUCUUCAGUUAA   1624 Target Full Sequence	2.5	Arabidopsis thaliana aminophospholipid flippase (ALA1) mRNA, complete cds	NA	coding protein	psRNATarget