ncRNA ID | novel_bol_miR22 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC7:34436391-34436549 [+] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 25 |
Mature sequence(if miRNA) | 135 - GAAUUAUAAGUCGUCUGUGUAUAAU - 159 |
Stem-loop(if miRNA) |
--                 A C                  A   UACAA      C           UUUUC    AUUCU   UAUACACAGACGACUUA A UUCAGUCGUCCACGAGAC ACU     GUAAGU GUCCAGGAUUU     UGAG     G   ||||||||||||||||| | |||||||||||||||||| |||     |||||| |||||||||||     ||||     G   AUAUGUGUCUGCUGAAU U AAGUCAGCAGGUGCUCUG UGA     CAUUCA CAGGUCCUAAA     GCUC     U UA                 A U                  C   CUUUA      A           ----U    CAAAC |
Stem-loop sequence | UAUACACAGACGACUUAAACUUCAGUCGUCCACGAGACAACUUACAAGUAAGUCGUCCAGGAUUUUUUUCUGAGAUUCUGGUCAAACCUCGUAAAUCCUGGACAACUUACAUUUCAGUCGUCUCGUGGACGACUGAAUUAUAAGUCGUCUGUGUAUAAU |