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BaseInfo

ncRNA ID ath-miRf10686-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GUAAUUUUCCCGCCAAAAACU - NA
Stem-loop(if miRNA)                             ACU     CGUUA  -          G  U   ---AAU      ---  UA   U
GCGUAAACCUGUAAUUUUCCCGCCAAAA   CGUAA     UG AAUUUUUUUG CG GAA      UCCGGG   UU  CGC U
||||||||||||||||||||||||||||   |||||     || |||||||||| || |||      ||||||   ||  ||| U
CGCAUUUGGACAUUAAAAGGGCGGUUUU   GCAUU     AC UUAAAAAGGC GU UUU      GGGCCU   AA  GCG U
                            --C     --UGG  A          G  U   GGUUUU      UAA  GG   G
Stem-loop sequence GCGUAAACCUGUAAUUUUCCCGCCAAAAACUCGUAACGUUAUGAAUUUUUUUGGCGUGAAAAUUCCGGGUUUACGCUUUUGGCGGGAAAAUUCCGGGUUUUGGUUUUUGGCGGAAAAAUUACAGGUUUACGCUUUUGGCGGGAAAAUUACAGGUUUACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_127230.4
ncRNA:21   UCAAAAACCGCCCUUUUAAUG   1
  **||||||||||||||||*|*
targets:22   UAUUUUUGGCGGGAAAAUCAA   42

2.5 Arabidopsis thaliana Transducin family protein / WD-40 repeat family protein (MSI2), mRNA Transducin family protein / WD-40 repeat family protein(MSI2) coding protein psRNATarget