ncRNA ID | ath-miRf10686-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GUAAUUUUCCCGCCAAAAACU - NA |
Stem-loop(if miRNA) |
                            ACU     CGUUA  -          G  U   ---AAU      ---  UA   U GCGUAAACCUGUAAUUUUCCCGCCAAAA   CGUAA     UG AAUUUUUUUG CG GAA      UCCGGG   UU  CGC U ||||||||||||||||||||||||||||   |||||     || |||||||||| || |||      ||||||   ||  ||| U CGCAUUUGGACAUUAAAAGGGCGGUUUU   GCAUU     AC UUAAAAAGGC GU UUU      GGGCCU   AA  GCG U                             --C     --UGG  A          G  U   GGUUUU      UAA  GG   G |
Stem-loop sequence | GCGUAAACCUGUAAUUUUCCCGCCAAAAACUCGUAACGUUAUGAAUUUUUUUGGCGUGAAAAUUCCGGGUUUACGCUUUUGGCGGGAAAAUUCCGGGUUUUGGUUUUUGGCGGAAAAAUUACAGGUUUACGCUUUUGGCGGGAAAAUUACAGGUUUACGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_127230.4 |
|
2.5 | Arabidopsis thaliana Transducin family protein / WD-40 repeat family protein (MSI2), mRNA | Transducin family protein / WD-40 repeat family protein(MSI2) | coding protein | psRNATarget |