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BaseInfo

ncRNA ID novel_bol_miR9
Species Brassica oleracea
Class miRNA
Genome position ChrC6:11138339-11138517 [-]
Reference genome BOL
Source SRR961924;SRR961925
Length 27
Mature sequence(if miRNA) 1 - GAGGUUUAGUUGUAGUACUUAGGGAUC - 27
Stem-loop(if miRNA) --       -AU            A                  AA      A     A            U     CAAUCAAA  UCC   G
  UCCCUAA   CUACAACUGAAC UUUUAUUUGAGAGAGUAA  UCACUC UUAGG UAAUUUGAGUGA AUCAG        GC   CCG C
  |||||||   |||||||||||| ||||||||||||||||||  |||||| ||||| |||||||||||| |||||        ||   |||
  AGGGAUU   GAUGUUGAUUUG AGAAUAAACUCUCUCAUU  AGUGAG AAUUC AUUAAACUCACU UAGUU        CG   GGC A
CU       CAU            G                  -A      G     C            C     ---UAAAC  --C   A
Stem-loop sequence UCCCUAAAUCUACAACUGAACAUUUUAUUUGAGAGAGUAAAAUCACUCAUUAGGAUAAUUUGAGUGAUAUCAGCAAUCAAAGCUCCCCGGCAACGGCGCCAAAUUUGAUCUCACUCAAAUUACCUUAAGGAGUGAAUUACUCUCUCAAAUAAGAGGUUUAGUUGUAGUACUUAGGGAUC