ncRNA ID | novel_bol_miR9 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC6:11138339-11138517 [-] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 27 |
Mature sequence(if miRNA) | 1 - GAGGUUUAGUUGUAGUACUUAGGGAUC - 27 |
Stem-loop(if miRNA) |
--       -AU            A                  AA      A     A            U     CAAUCAAA  UCC   G   UCCCUAA   CUACAACUGAAC UUUUAUUUGAGAGAGUAA  UCACUC UUAGG UAAUUUGAGUGA AUCAG        GC   CCG C   |||||||   |||||||||||| ||||||||||||||||||  |||||| ||||| |||||||||||| |||||        ||   |||   AGGGAUU   GAUGUUGAUUUG AGAAUAAACUCUCUCAUU  AGUGAG AAUUC AUUAAACUCACU UAGUU        CG   GGC A CU       CAU            G                  -A      G     C            C     ---UAAAC  --C   A |
Stem-loop sequence | UCCCUAAAUCUACAACUGAACAUUUUAUUUGAGAGAGUAAAAUCACUCAUUAGGAUAAUUUGAGUGAUAUCAGCAAUCAAAGCUCCCCGGCAACGGCGCCAAAUUUGAUCUCACUCAAAUUACCUUAAGGAGUGAAUUACUCUCUCAAAUAAGAGGUUUAGUUGUAGUACUUAGGGAUC |