ncRNA ID | novel_bol_miR8 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC6:6475904-6475961 [+] |
Reference genome | BOL |
Source | SRR961924 |
Length | 25 |
Mature sequence(if miRNA) | 1 - ACUAAAAAAGUUAAGAACCGGCUCC - 25 |
Stem-loop(if miRNA) |
--         G           C  CUA   ACUAAAAAA UUAAGAACCGG UC   U   ||||||||| ||||||||||| ||   UGAUUUUUU GAUUCUUGGCC AG   U AU         A           A  AAU |
Stem-loop sequence | ACUAAAAAAGUUAAGAACCGGCUCCUAUUUAAGAACCGGUUCUUAGAUUUUUUAGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013746528.1 |
|
3.0 | PREDICTED: Brassica oleracea var. oleracea pre-rRNA-processing protein ESF2 (LOC106309493), transcript variant X1, mRNA | pre-rRNA-processing protein ESF2(LOC106309493) | coding protein | psRNATarget | |||||||||
XM_013746529.1 |
|
3.0 | PREDICTED: Brassica oleracea var. oleracea pre-rRNA-processing protein ESF2 (LOC106309493), transcript variant X2, mRNA | pre-rRNA-processing protein ESF2(LOC106309493) | coding protein | psRNATarget |