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BaseInfo

ncRNA ID ath-miR776
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:22795618-22795735 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 82 - UCUAAGUCUUCUAUUGAUGUU - 102
Stem-loop(if miRNA)  UG  A   U     C    -         UU    AG   A  U     -   U   AA
U  GG UUA AGCCA GAAC UCAAUAGAA  CUUA  AUC UG GAAAA CGU GAC  G
|  || ||| ||||| |||| |||||||||  ||||  ||| || ||||| ||| |||
A  CC AAU UCGGU CUUG AGUUAUCUU  GAAU  UAG AC CUUUU GCA CUG  A
 GU  -   U     A    U         CU    CU   A  -     A   U   CU
Stem-loop sequence UUGGGAUUAUAGCCACGAACUCAAUAGAAUUCUUAAGAUCAUGUGAAAACGUUGACAAGAUCGUCUACGAUUUUCCAAGAUUCUAAGUCUUCUAUUGAUGUUCAUGGCUUUAACCUGA

Reference

1 PMID:16954541
"MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant";
Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC;
Genome Res. 16:1276-1288(2006).
2 PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes";
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC;
PLoS One. 2:e219(2007).