ncRNA ID | ath-miR776 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:22795618-22795735 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 82 - UCUAAGUCUUCUAUUGAUGUU - 102 |
Stem-loop(if miRNA) |
 UG  A   U     C    -         UU    AG   A  U     -   U   AA U  GG UUA AGCCA GAAC UCAAUAGAA  CUUA  AUC UG GAAAA CGU GAC  G |  || ||| ||||| |||| |||||||||  ||||  ||| || ||||| ||| ||| A  CC AAU UCGGU CUUG AGUUAUCUU  GAAU  UAG AC CUUUU GCA CUG  A  GU  -   U     A    U         CU    CU   A  -     A   U   CU |
Stem-loop sequence | UUGGGAUUAUAGCCACGAACUCAAUAGAAUUCUUAAGAUCAUGUGAAAACGUUGACAAGAUCGUCUACGAUUUUCCAAGAUUCUAAGUCUUCUAUUGAUGUUCAUGGCUUUAACCUGA |
1 | PMID:16954541
"MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant"; Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC; Genome Res. 16:1276-1288(2006). |
2 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |