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BaseInfo

ncRNA ID novel_bol_miR3
Species Brassica oleracea
Class miRNA
Genome position ChrC6:26721686-26721911 [-]
Reference genome BOL
Source SRR961924;SRR961925
Length 27
Mature sequence(if miRNA) 1 - AAAAUCUAAGAAAAACUAAGAACCAUC - 27
Stem-loop(if miRNA) --C         C                                      CGCC            U      U  UUAACU   G         ---------UG    UUUUAAUUCAUG
   GGUUCUUAG UUUUCUUAGAUUUUAACUAAGAAAAGCUAAGAACCGUC    UCUUAAAUAAGA AUAUAA GA      CCG UCUCUUAGC           GAGU            A
   ||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||| ||      ||| |||||||||           ||||
   CCAAGAAUC AAAAGAAUCUAAAAUUGAUUCUUUUCGAUUCUUGGCAG    AGAAUUUAUUCU UAUAUU CU      GGC AGAGAAUCG           UUGU            U
CUA         A                                      ----            C      -  -----C   -         UCACAUUUUUU    UUUUUCACAGUU
Stem-loop sequence CGGUUCUUAGCUUUUCUUAGAUUUUAACUAAGAAAAGCUAAGAACCGUCCGCCUCUUAAAUAAGAUAUAUAAUGAUUAACUCCGGUCUCUUAGCUGGAGUUUUUAAUUCAUGAUUUGACACUUUUUUGUUUUUUUUACACUGCUAAGAGACGGCUCUUAUAUCUCUUAUUUAAGAGACGGUUCUUAGCUUUUCUUAGUUAAAAUCUAAGAAAAACUAAGAACCAUC