ncRNA ID | novel_bol_miR3 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC6:26721686-26721911 [-] |
Reference genome | BOL |
Source | SRR961924;SRR961925 |
Length | 27 |
Mature sequence(if miRNA) | 1 - AAAAUCUAAGAAAAACUAAGAACCAUC - 27 |
Stem-loop(if miRNA) |
--C         C                                      CGCC            U      U  UUAACU   G         ---------UG    UUUUAAUUCAUG    GGUUCUUAG UUUUCUUAGAUUUUAACUAAGAAAAGCUAAGAACCGUC    UCUUAAAUAAGA AUAUAA GA      CCG UCUCUUAGC           GAGU            A    ||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||| ||      ||| |||||||||           ||||    CCAAGAAUC AAAAGAAUCUAAAAUUGAUUCUUUUCGAUUCUUGGCAG    AGAAUUUAUUCU UAUAUU CU      GGC AGAGAAUCG           UUGU            U CUA         A                                      ----            C      -  -----C   -         UCACAUUUUUU    UUUUUCACAGUU |
Stem-loop sequence | CGGUUCUUAGCUUUUCUUAGAUUUUAACUAAGAAAAGCUAAGAACCGUCCGCCUCUUAAAUAAGAUAUAUAAUGAUUAACUCCGGUCUCUUAGCUGGAGUUUUUAAUUCAUGAUUUGACACUUUUUUGUUUUUUUUACACUGCUAAGAGACGGCUCUUAUAUCUCUUAUUUAAGAGACGGUUCUUAGCUUUUCUUAGUUAAAAUCUAAGAAAAACUAAGAACCAUC |